BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E11LP1|AL426545
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1043 1688 0.0
>3x_Contig1043
Length = 5132
Score = 1688 bits (851), Expect = 0.0
Identities = 862/865 (99%), Gaps = 1/865 (0%)
Strand = Plus / Plus
Query: 1 gatcacaaaagaattttagaatcacaagttatcagtccattcacactatatatatagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gatcacaaaagaattttagaatcacaagttatcagtccattcacactatatatatagtta 266
Query: 61 tccccccatgaggtaagtggcccggcaattgtattatctttttttttttttcgtttattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tccccccatgaggtaagtggcccggcaattgtattatctttttttttttttcgtttattc 326
Query: 121 cgattcgaatgctagcagggtccaaatcgcactcacacaatatgtaaaccgaaccagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cgattcgaatgctagcagggtccaaatcgcactcacacaatatgtaaaccgaaccagaga 386
Query: 181 gacttgcatatctacttatatagatgcatacataatcatacccctctcctatacccctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gacttgcatatctacttatatagatgcatacataatcatacccctctcctatacccctct 446
Query: 241 ctctttcttacatcattaacacgcatagtcttgtcaaatcaactttatctcgaatttcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctctttcttacatcattaacacgcatagtcttgtcaaatcaactttatctcgaatttcac 506
Query: 301 aaggtttgcctgcgttgctgtggattttccttggctttcattcctgtgtgtccgtttctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 aaggtttgcctgcgttgctgtggattttccttggctttcattcctgtgtgtccgtttctg 566
Query: 361 gtcgtggttcctcttttgatagataaaaaacaggcgaaaatcagtgggagtcggaaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtcgtggttcctcttttgatagataaaaaacaggcgaaaatcagtgggagtcggaaaaat 626
Query: 421 ataaagctgtatactggccgacgcacccaattgaacaaatacagtattatttttctgctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ataaagctgtatactggccgacgcacccaattgaacaaatacagtattatttttctgctg 686
Query: 481 taagaagagctgaaactacataaaatacctgggttcgtgagtattatcccaaaacttggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 taagaagagctgaaactacataaaatacctgggttcgtgagtattatcccaaaacttggc 746
Query: 541 cgttgacagctcgagaatttttaggaagttcctcggttcaactttatcttagcggtastt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 747 cgttgacagctcgagaatttttaggaagttcctcggttcaactttatcttagcggtagct 806
Query: 601 ttcttttttttttcgcttttgatttttttggacttttctgactgttaaaagaaaatccaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttcttttttttttcgcttttgatttttttggacttttctgactgttaaaagaaaatccaa 866
Query: 661 taacgatattcttagttttagggaaacagatcaccgcaaacagcagaagacagagtattc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 taacgatattcttagttttagggaaacagatcaccgcaaacagcagaagacagagtattc 926
Query: 721 aaatccaacaaaacctaataataactagctgttatagcgtgatccgatattctggtcgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 aaatccaacaaaacctaataataactagctgttatagcgtgatccgatattctggtcgaa 986
Query: 781 ggcagtgagagtaaccgttctggtgaatttttttgcttctgcttttacagttttcaacct 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 ggcagtgagagtaaccgttctggtgaatttttttgcttctgcttttacagttttcaacc- 1045
Query: 841 tttttcaatctcattttttcactct 865
|||||||||||||||||||||||||
Sbjct: 1046 tttttcaatctcattttttcactct 1070
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,776
Number of Sequences: 1807
Number of extensions: 15776
Number of successful extensions: 256
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)